About:

• Bioinformatician with 5+ years industry experience and 8 years of post-secondary education.
• Located in Vancouver, British Columbia
• My preferred programming language is R but I am fine with Python too,
• Fluent in database development & SQL querying
• Significant experience in Colorectal, Prostate, Bladder & Breast Cancer research
• Skilled at cleaning messy data

Specialties:

Bioinformatics, Data Science, Data Curation, R/Bioconductor, Data Analysis, Visualization

Education:

Massey University, Auckland, New Zealand & Genome Sciences Centre, Vancouver, British Columbia, October 2018 – August 2022 PhD in Computer Science (Bioinformatics)

University of Calgary, Calgary, AB. Canada September 2012 – June 2015 Bachelor of Health Sciences in Bioinformatics (Honours)

Carleton University, Ottawa, ON. Canada September 2010 – April 2011 General Science Courses (Transferred)

Languages:

R, Python, Perl, Bash, Java, HTML, XML, JSON, CSS, sed/awk, LaTeX

Operating Systems:

Linux, Mac OS X, Windows

Tools:

RStudio, Tidyverse, Bioconductor/CRAN, Amazon Web Services, EC2, S3, Docker, Pandas, Numpy, scikit-learn, snakemake, slurm, Atlassian JIRA/Confluence, Microsoft Office Suite, Salesforce, Galaxy, Git/Github, Visual Studio Code, Jupyter, Eclipse, JDK, NCBI Geo, UCSC Genome Browser, DAVID, TCGA, ICGC, UK Biobank

Database & Data Management Tools:

PostgreSQL, MySQL, SQLite

Data Visualization:

R/Shiny, Clustering Heatmaps, Survival Analysis, Protein structture modelling, Population Demographic Histograms, Outcome Analysis Plots, Network Analysis, Pathway Analysis, ICC Plots, PCA Plots